Electron Microscopy Data Bank

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Cryo-EM Structure of native Photosystem II assembly intermediate fromChlamydomonas reinhardtii

Release date: Jan. 31, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8r2i
Q-score: 0.533

Fadeeva M, Klaiman D, Kandiah E, Nelson N

Front Plant Sci (2023) 14 pp. 1334608-1334608 [ DOI: doi:10.3389/fpls.2023.1334608 Pubmed: 38322422 ]

Sample:

Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Chlamydomonas reinhardtii)
Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
Octyl beta-d-glucopyranoside (292 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Chlorophyll a (893 Da, Ligand)
Dodecyl-beta-d-maltoside (510 Da, Ligand)
Photosystem ii reaction center protein h (7 kDa, Protein from Chlamydomonas reinhardtii)
Bicarbonate ion (61 Da, Ligand)
Photosystem ii reaction center protein i (3 kDa, Protein from Chlamydomonas reinhardtii)
Cytochrome b559 subunit beta (3 kDa, Protein from Chlamydomonas reinhardtii)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
Protoporphyrin ix containing fe (616 Da, Ligand)
Chain u, predicted protein (11 kDa, Protein from Chlamydomonas reinhardtii)
Photosystem ii cp43 reaction center protein (46 kDa, Protein from Chlamydomonas reinhardtii)
Photosystem ii reaction center protein k (4 kDa, Protein from Chlamydomonas reinhardtii)
Photosystem ii cp47 reaction center protein (53 kDa, Protein from Chlamydomonas reinhardtii)
Water (18 Da, Ligand)
Pheophytin a (871 Da, Ligand)
Cytochrome b559 subunit alpha (8 kDa, Protein from Chlamydomonas reinhardtii)
Photosystem ii d2 protein (39 kDa, Protein from Chlamydomonas reinhardtii)
Fe (ii) ion (55 Da, Ligand)
Photosystem ii assembly intermediate from chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
Photosystem ii protein d1 (36 kDa, Protein from Chlamydomonas reinhardtii)
Beta-carotene (536 Da, Ligand)

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